CDS

Accession Number TCMCG057C15722
gbkey CDS
Protein Id XP_018481313.1
Location join(4659093..4659143,4659255..4659365,4659466..4659601,4659736..4659890,4659979..4660086,4660201..4660290,4660395..4660496)
Gene LOC108852309
GeneID 108852309
Organism Raphanus sativus

Protein

Length 250aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018625811.1
Definition PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs
KEGG_TC -
KEGG_Module M00410        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K12188        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0000814        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032509        [VIEW IN EMBL-EBI]
GO:0032511        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0036452        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043162        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043328        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045324        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071985        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072665        [VIEW IN EMBL-EBI]
GO:0072666        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCGACGGCGACCAGGAATCGGAGGTCTACAAAAGGCGGCAGCTGCTCGGGATCAGTACAGGTTATTAGGAGAAAATGTGGCAAAGTTAAGGACTGATATGATGAAAGAGCAGCTCGCCACTTTCAAGTCTCAGCTTGAAGAGTTCGCTCGTAAACACAAGAATGACATTCGTAAAAATCCAGCGTTTAGAGCTCAGTTCCATGAAATGTGTGCTAAAGTTGGTGTGGATCCACTTGCTTCCAACAAGGGCTTCTGGGCTGAGCTCCTTGGAATTGGTGACTTCTACTATGAACTTGGAGTTCAGATTATTGAAGTTTGCATGCTTACAAGGTCACTCAATGGAGGTTTGATCAGCTTGCAAGAGCTCTGCAGCCATCTTCGTCAGAGAAGGAAGAAAGACCGTGAAGCTGTAACTGAAGATGATTGTCTTCGTGCTATTAGCAAGCTTAAGGTATTGGGTAGCGGATTTGAGGTTATCACGATTGGCAAGAAAAAGCTAGTCCGTTCAGTCCCCACTGAGCTCAACAAAGACCATAATCAAATCTTGGAGCTGGCTCAGGGTCAAGGCTTTGTTACTGTGGAAGAGGTACAAAGACGTCTCTCGTGGACATCTGGTCGGGTCATAGATGCTCTCGAAACTTTTTTAGAGGAGGGCCTCGCAATGATCGACAATGGCAACAAAGACGGAAAATGTCAGTACTGGTTCCCCTGTGTCTCTTCTGTTTACTCAATCGTTGGATCTGATACTTAA
Protein:  
MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLATFKSQLEEFARKHKNDIRKNPAFRAQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSLNGGLISLQELCSHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHNQILELAQGQGFVTVEEVQRRLSWTSGRVIDALETFLEEGLAMIDNGNKDGKCQYWFPCVSSVYSIVGSDT